BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D10LP1|AL425370
(1012 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig121 1284 0.0
3x_Contig796 320 3e-87
>3x_Contig121
Length = 884
Score = 1284 bits (645), Expect = 0.0
Identities = 686/701 (97%), Gaps = 1/701 (0%)
Strand = Plus / Plus
Query: 1 gttaccaccggtgattaaatgtgatataaggtctgatttgttgggattaatcgacaatcc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 184 gttaccaccggtgattaaatgtgatacaaggtctgatttgttgggattaatcgacaatcc 243
Query: 61 ttcggttgagtttaatgtactgatagccgtaagctttggtaagttaatacccaaacagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttcggttgagtttaatgtactgatagccgtaagctttggtaagttaatacccaaacagct 303
Query: 121 aattgaaaaggtcgacggaaaagctttcaatatccacccatctttgttaccgcgttaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aattgaaaaggtcgacggaaaagctttcaatatccacccatctttgttaccgcgttaccg 363
Query: 181 aggctccyccccgatccagtatacacttttgaacagagatgagtntacaggtgtnacgat 240
||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 364 aggctcctccccgatccagtatacacttttgaacagagatgagtttacaggtgtgacgat 423
Query: 241 tcagagtttacatccaacgaaattcgaccatggagaaatcatcaaacagacggctccgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcagagtttacatccaacgaaattcgaccatggagaaatcatcaaacagacggctccgtt 483
Query: 301 gtcagtccaagaaattttgaagcttggcaccgtcggtaaatttgacgaggatgtccccga 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtcagtgcaagaaattttgaagcttggcaccgtcggtaaatttgacgaggatgtccccga 543
Query: 361 gaaggttgcaacacttatggatcaattgggattgaaaagtggtgaattgttgcaacagaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaaggttgcaacacttatggatcaattgggattgaaaagtggtgaattgttgcaacagat 603
Query: 421 gaaaagggaaagggatttcaaaccaaaaccgaacccaaactatgaaccttcacttgctcc 480
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 604 gataagggaaagggatttcaaaccaaaaccgaacccaaactatgaactttcacttgctcc 663
Query: 481 caaaataactactgaaatgaaacaaataaattggaaaaacgaaaggaagtcacggttatt 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 664 caaaataactactgaaatgaaacaaataaattggaaaaacgaaaggaagttacggttatt 723
Query: 541 ggccaagaatgatgccttagggtcgttgtactgctataaattatcattaccaaagaggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ggccaagaatgatgccttagggtcgttgtactgctataaattatcattaccaaagaggaa 783
Query: 601 gaaagaagtnatgaagaaacgtattatattccccgaattatttgatttgaatnaaacc-a 659
||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||| |
Sbjct: 784 gaaagaagttatgaagaaacgtattatattccccgaattatttgatttgcatgaaaccta 843
Query: 660 tatcaatgaaacctggagaatttaaattaagtkaggacgag 700
|||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 844 tatcaatgaaacctggcgaatttaaattaagtgaggacgag 884
>3x_Contig796
Length = 2052
Score = 320 bits (161), Expect = 3e-87
Identities = 203/216 (93%), Gaps = 4/216 (1%)
Strand = Plus / Minus
Query: 801 ttwataaaagatgtggtaagatgaactccaatgaattcttataagggaggtcaaccagaa 860
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2052 ttaataaaagatgtggtaagatgaactccaatgagttcttataagggaggtcaaccagaa 1993
Query: 861 aattatcataaaaatcata-tttcttcgttccataagatagtkcgt-ctat--gtwgata 916
|||||||| ||||||||| ||||| |||||||||||||||| ||| ||| || ||||
Sbjct: 1992 aattatcaggaaaatcatagtttctacgttccataagatagttcgttctagtggtagata 1933
Query: 917 atatagaaatacatatgtaggcttctgtatggtgtttgttcttcgaatatatcatgtcaa 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1932 atatagaaatacatatgtaggcttctgtatggtgtttgttcttcgaatatatcatgtcaa 1873
Query: 977 attcagtttcgttggcaaaaatgtgtwctcaagacg 1012
|||||||||||||||||||||||||| |||||||||
Sbjct: 1872 attcagtttcgttggcaaaaatgtgtactcaagacg 1837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7948
Number of Sequences: 1807
Number of extensions: 7948
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 2
length of query: 1012
length of database: 10,358,551
effective HSP length: 16
effective length of query: 996
effective length of database: 10,329,639
effective search space: 10288320444
effective search space used: 10288320444
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)